SSpro and ACCpro version 4.0 (2005) still available here.SCRATCH-1D release 1.0 (2013, linux version, 1.6 GB).SCRATCH-1D release 1.1 (2015, linux version, 2.7 GB).SCRATCH-1D release 1.2 (2018, linux version, 6.3 GB).SCRATCH-1D release 1.3 (2020, linux version, 9.4 GB).If you downloaded the package prior to thatĭate, we strongly recommend that you reinstall it. HOMOLpro release 2.0 (2021) : Homology-based secondary structure & solvent accessibility predictionĪ bug in SCRATCH-1D release 2.0, containing SSpro 6.0 and ACCpro 6.0,.

PROFILpro release 2.0 (2021) : Protein evolutionary information / sequence profiles.EVALpro release 1.0 (2019) : Evaluation of sequence-based & profile-based predictors.ACCpro20 release 6.0 (2021) : Protein relative solvent accessibility prediction (thresholds 0% to 95%).

ACCpro release 6.0 (2021) : Protein relative solvent accessibility prediction (at the 25% threshold).

SSpro8 release 6.0 (2021) : Protein secondary structure prediction (8-class).

SSpro release 6.0 (2021) : Protein secondary structure prediction (3-class).

SCRATCH-1D release 2.0 for Ubuntu (2021, Ubuntu Only, 1.4 GB).

The 4 predictors are included in the SCRATCH suite of 1D predictors available for download here:

SSpro, SSpro8, ACCpro, ACCpro20 : Protein Secondary StructureĪnd Relative Solvent Accessibility Prediction Institute for Genomics and Bioinformatics. This explains why silk is composed almost entirely of glycine, alanine, and serine, the three amino acids with the smallest side chains.UCI :: Institute for Genomics and Bioinformatics - Download PageĪll software and related material contained herein can be downloaded freely for academic, non-commercial, research use only.įor any other use, please contact pfbaldi gmail com.Ĭopyright 2005-2021. In consequence very bulky side chains make the structure unstable. Unlike the α helix, though, the side chains are squeezed rather close together in a pleated-sheet arrangement.

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